Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479588: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322710' containing sample 'TKK_03_0094'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.5M spots, 901.9M bases, 405.7Mb downloads

UUID: 9ef16239-e460-4653-96b3-a074a17d9345

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_03_0094 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235435 • SRP039144 • All experiments • All runs

Sample:

SAMN02585925 • SRS564966 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_03_0094

Library:

Name: Pond-322710

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 481201.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5EVG4

material_type: DNA:DNA Somatic

product_order: PDO-2814

product_part_number: P-MCV-0004

project: G58066

research_project: RP-114

root_sample_id: SM-4P5BI

sample_id: SM-5EVG4

work_request: 39951

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.5M spots, 901.9M bases, 405.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180284	2,220,895	448.6M	202.5Mb	2014-03-01
SRR1180371	2,244,152	453.3M	203.3Mb	2014-03-01

ID:: 669022

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